Features:

  • Intuitive User Interface
  • Display Species and Compartments in color
  • Extensive Notes Description (to Compartment, Species, Reaction, Protein)
  • Support New Symbols
    - Relationship between elements: unknown catalysis, unknown inhibition.
    - Residue Modification: Hydroxlated
  • Block Diagram support
    - Extract the control relationship between Proteins from the pathway diagram.
    - Describe and Verify the Modifications/Activations Logic.
  • SBML Level-2 and Level-1 Compliant
  • Export Lists to CSV format
  • Export diagram to PNG format

 

Operating Environment:

CellDesigner 2.0 beta requires Java2 Runtime Environment (JRE1.4.2 or later) on

  • Windows (98SE or later)
  • MacOSX (10.3 or later + Java 1.4.2_05 or later)
  • Linux with X Window System

*Note: If you are interested in time evolving simulation and analysis on biochemical networks, we recommend you to install the Systems Biology Workbench (SBW) 1.0.5 and SBW-powered softwares before you install CellDesigner.